Hi, DeepChem Community. Well, I check your github and want to install deepchem in my conda evironment, but unfortunately, I find myself got into trouble.
My conda list:
Name Version Build Channel
astunparse 1.6.3 pypi_0 pypi
blas 1.0 mkl defaults
bottleneck 1.4.2 py39hc99e966_0 defaults
brotlipy 0.7.0 py39h2bbff1b_1003 defaults
ca-certificates 2024.12.31 haa95532_0 defaults
cachetools 5.5.1 pypi_0 pypi
certifi 2024.12.14 pypi_0 pypi
cffi 1.17.1 py39h827c3e9_1 defaults
charset-normalizer 3.4.1 pypi_0 pypi
cpuonly 2.0 0 pytorch
cryptography 43.0.3 py39hbd6ee87_1 defaults
filelock 3.6.0 pyhd3eb1b0_0
flatbuffers 25.1.24 pypi_0 pypi
freetype 2.12.1 ha860e81_0 defaults
gast 0.6.0 pypi_0 pypi
gmpy2 2.1.2 py39h7f96b67_0 defaults
google-auth 2.38.0 pypi_0 pypi
google-auth-oauthlib 1.2.1 pypi_0 pypi
google-pasta 0.2.0 pypi_0 pypi
grpcio 1.70.0 pypi_0 pypi
h5py 3.12.1 pypi_0 pypi
idna 3.10 pypi_0 pypi
importlib-metadata 8.6.1 pypi_0 pypi
intel-openmp 2023.1.0 h59b6b97_46320 defaults
jinja2 3.1.5 py39haa95532_0 defaults
joblib 1.4.2 pypi_0 pypi
jpeg 9e h827c3e9_3 defaults
keras 2.15.0 pypi_0 pypi
lcms2 2.16 hb4a4139_0 defaults
lerc 4.0.0 h5da7b33_0 defaults
libclang 18.1.1 pypi_0 pypi
libdeflate 1.22 h5bf469e_0 defaults
libjpeg-turbo 2.0.0 h196d8e1_0 defaults
libpng 1.6.39 h8cc25b3_0 defaults
libtiff 4.5.1 h44ae7cf_1 defaults
libuv 1.48.0 h827c3e9_0 defaults
libwebp-base 1.3.2 h3d04722_1 defaults
lz4-c 1.9.4 h2bbff1b_1 defaults
markdown 3.7 pypi_0 pypi
markupsafe 3.0.2 pypi_0 pypi
mkl 2023.1.0 h6b88ed4_46358 defaults
mkl-service 2.4.0 py39h827c3e9_2 defaults
mkl_fft 1.3.11 py39h827c3e9_0 defaults
mkl_random 1.2.8 py39hc64d2fc_0 defaults
ml-dtypes 0.2.0 pypi_0 pypi
mpc 1.1.0 h7edee0f_1 defaults
mpfr 4.0.2 h62dcd97_1 defaults
mpir 3.0.0 hec2e145_1 defaults
mpmath 1.3.0 py39haa95532_0 defaults
networkx 2.7.1 pyhd3eb1b0_0
numexpr 2.10.1 py39h4cd664f_0 defaults
numpy 1.26.4 pypi_0 pypi
numpy-base 2.0.2 py39h65a83cf_0 defaults
oauthlib 3.2.2 pypi_0 pypi
openjpeg 2.5.2 hae555c5_0 defaults
openssl 3.0.15 h827c3e9_0 defaults
packaging 24.2 pypi_0 pypi
pandas 2.2.3 py39h5da7b33_0 defaults
pillow 11.0.0 py39h096bfcc_1 defaults
pip 24.2 py39haa95532_0 defaults
protobuf 4.25.6 pypi_0 pypi
pyasn1 0.6.1 pypi_0 pypi
pyasn1-modules 0.4.1 pypi_0 pypi
pycparser 2.21 pyhd3eb1b0_0
pyopenssl 24.2.1 py39haa95532_0 defaults
pysocks 1.7.1 py39haa95532_0 defaults
python 3.9.21 h8205438_1 defaults
python-dateutil 2.8.2 pyhd3eb1b0_0
python-tzdata 2023.3 pyhd3eb1b0_0
pytorch 2.2.1 py3.9_cpu_0 pytorch
pytorch-mutex 1.0 cpu pytorch
pytz 2021.3 pyhd3eb1b0_0
pyyaml 6.0.2 py39h827c3e9_0 defaults
requests 2.27.1 pyhd3eb1b0_0
requests-oauthlib 2.0.0 pypi_0 pypi
rsa 4.9 pypi_0 pypi
scikit-learn 1.6.1 pypi_0 pypi
setuptools 72.1.0 py39haa95532_0 defaults
six 1.17.0 pypi_0 pypi
sqlite 3.45.3 h2bbff1b_0 defaults
sympy 1.13.3 py39haa95532_0 defaults
tbb 2021.8.0 h59b6b97_0 defaults
tensorboard 2.15.2 pypi_0 pypi
tensorboard-data-server 0.7.2 pypi_0 pypi
tensorflow 2.15.0 pypi_0 pypi
tensorflow-estimator 2.15.0 pypi_0 pypi
tensorflow-intel 2.15.0 pypi_0 pypi
tensorflow-io-gcs-filesystem 0.31.0 pypi_0 pypi
termcolor 2.5.0 pypi_0 pypi
threadpoolctl 3.5.0 pypi_0 pypi
torchaudio 2.2.1 py39_cpu pytorch
torchvision 0.17.1 py39_cpu pytorch
typing_extensions 4.1.1 pyh06a4308_0
tzdata 2025a h04d1e81_0
urllib3 2.3.0 pypi_0 pypi
vc 14.40 haa95532_2 defaults
vs2015_runtime 14.42.34433 h9531ae6_2 defaults
werkzeug 3.1.3 pypi_0 pypi
wheel 0.37.1 pyhd3eb1b0_0
win_inet_pton 1.1.0 py39haa95532_0 defaults
wrapt 1.14.1 pypi_0 pypi
xz 5.4.6 h8cc25b3_1 defaults
yaml 0.2.5 he774522_0 defaults
zipp 3.21.0 pypi_0 pypi
zlib 1.2.13 h8cc25b3_1 defaults
zstd 1.5.6 h8880b57_0 defaults
And when I am trying to run:
import deepchem as dc
dc.version
The vscode which I use my conda environment will say:
Traceback (most recent call last):
ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject
I am deeply upset. I have tried to make now conda environment or to degrade numpypandas. But I still counld not make it. Jesus!